dbCAN HGM

Cluster: Rep_439_CGC45

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	Rep_439_c_4	Rep_439_c_4_1135	1392012	1394087	+	3.A.16.1.1
pfam	Rep_439_c_4	Rep_439_c_4_1136	1394143	1394997	+	CTP_transf_1
CAZyme	Rep_439_c_4	Rep_439_c_4_1137	1395094	1396236	-	GT19
pfam	Rep_439_c_4	Rep_439_c_4_1138	1396233	1397012	-	SurE
TC	Rep_439_c_4	Rep_439_c_4_1139	1397214	1397975	+	8.A.3.2.3
pfam	Rep_439_c_4	Rep_439_c_4_1140	1397991	1398878	+	ParBc \| HTH_ParB \| ParB_dimer
pfam	Rep_439_c_4	Rep_439_c_4_1141	1398875	1399666	+	DUF5683
CAZyme	Rep_439_c_4	Rep_439_c_4_1142	1399675	1400967	+	GH23

Gene ID: Rep_439_c_4_1135
Type: TC
Location: 1392012 - 1394087 (+)

Gene ID: Rep_439_c_4_1136
Type: pfam
Location: 1394143 - 1394997 (+)

Gene ID: Rep_439_c_4_1137
Type: CAZyme
Location: 1395094 - 1396236 (-)

Gene ID: Rep_439_c_4_1138
Type: pfam
Location: 1396233 - 1397012 (-)

Gene ID: Rep_439_c_4_1139
Type: TC
Location: 1397214 - 1397975 (+)

Gene ID: Rep_439_c_4_1140
Type: pfam
Location: 1397991 - 1398878 (+)

Gene ID: Rep_439_c_4_1141
Type: pfam
Location: 1398875 - 1399666 (+)

Gene ID: Rep_439_c_4_1142
Type: CAZyme
Location: 1399675 - 1400967 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.