Cluster: Rep_439_CGC44
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_439
- CGC Family ID: CGCFAM_00081
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_439_c_4 | Rep_439_c_4_1067 | 1310001 | 1311131 | + | 9.B.97.1.2 |
| TC | Rep_439_c_4 | Rep_439_c_4_1068 | 1311244 | 1312662 | - | 3.D.1.2.1 |
| TC | Rep_439_c_4 | Rep_439_c_4_1069 | 1312669 | 1314150 | - | 3.D.1.2.1 |
| TC | Rep_439_c_4 | Rep_439_c_4_1070 | 1314147 | 1316036 | - | 3.D.1.2.1 |
| TC | Rep_439_c_4 | Rep_439_c_4_1071 | 1316067 | 1316378 | - | 3.D.1.2.1 |
| TC | Rep_439_c_4 | Rep_439_c_4_1072 | 1316397 | 1316912 | - | 3.D.9.1.1 |
| STP | Rep_439_c_4 | Rep_439_c_4_1073 | 1316918 | 1317391 | - | Fer4 | Fer4 |
| TC | Rep_439_c_4 | Rep_439_c_4_1074 | 1317406 | 1318509 | - | 3.D.1.5.1 |
| TC | Rep_439_c_4 | Rep_439_c_4_1075 | 1318527 | 1320146 | - | 3.D.1.5.1 |
| TC | Rep_439_c_4 | Rep_439_c_4_1076 | 1320153 | 1320755 | - | 3.D.1.3.1 |
| TC | Rep_439_c_4 | Rep_439_c_4_1077 | 1320746 | 1321096 | - | 3.D.1.8.1 |
| NULL(UNKNOWN) | Rep_439_c_4 | Rep_439_c_4_1078 | 1321193 | 1321594 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_439_c_4 | Rep_439_c_4_1079 | 1321851 | 1326164 | - | GH2 |
| NULL(UNKNOWN) | Rep_439_c_4 | Rep_439_c_4_1080 | 1326161 | 1326337 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_439_c_4 | Rep_439_c_4_1081 | 1326375 | 1326899 | + | MGS |
| CAZyme | Rep_439_c_4 | Rep_439_c_4_1082 | 1327050 | 1330904 | - | GH31_18 |
Gene ID: Rep_439_c_4_1067
Type: TC
Location: 1310001 - 1311131 (+)
Type: TC
Location: 1310001 - 1311131 (+)
Gene ID: Rep_439_c_4_1068
Type: TC
Location: 1311244 - 1312662 (-)
Type: TC
Location: 1311244 - 1312662 (-)
Gene ID: Rep_439_c_4_1069
Type: TC
Location: 1312669 - 1314150 (-)
Type: TC
Location: 1312669 - 1314150 (-)
Gene ID: Rep_439_c_4_1070
Type: TC
Location: 1314147 - 1316036 (-)
Type: TC
Location: 1314147 - 1316036 (-)
Gene ID: Rep_439_c_4_1071
Type: TC
Location: 1316067 - 1316378 (-)
Type: TC
Location: 1316067 - 1316378 (-)
Gene ID: Rep_439_c_4_1072
Type: TC
Location: 1316397 - 1316912 (-)
Type: TC
Location: 1316397 - 1316912 (-)
Gene ID: Rep_439_c_4_1073
Type: STP
Location: 1316918 - 1317391 (-)
Type: STP
Location: 1316918 - 1317391 (-)
Gene ID: Rep_439_c_4_1074
Type: TC
Location: 1317406 - 1318509 (-)
Type: TC
Location: 1317406 - 1318509 (-)
Gene ID: Rep_439_c_4_1075
Type: TC
Location: 1318527 - 1320146 (-)
Type: TC
Location: 1318527 - 1320146 (-)
Gene ID: Rep_439_c_4_1076
Type: TC
Location: 1320153 - 1320755 (-)
Type: TC
Location: 1320153 - 1320755 (-)
Gene ID: Rep_439_c_4_1077
Type: TC
Location: 1320746 - 1321096 (-)
Type: TC
Location: 1320746 - 1321096 (-)
Gene ID: Rep_439_c_4_1078
Type:
Location: 1321193 - 1321594 (-)
Type:
Location: 1321193 - 1321594 (-)
Gene ID: Rep_439_c_4_1079
Type: CAZyme
Location: 1321851 - 1326164 (-)
Type: CAZyme
Location: 1321851 - 1326164 (-)
Gene ID: Rep_439_c_4_1080
Type:
Location: 1326161 - 1326337 (-)
Type:
Location: 1326161 - 1326337 (-)
Gene ID: Rep_439_c_4_1081
Type: pfam
Location: 1326375 - 1326899 (+)
Type: pfam
Location: 1326375 - 1326899 (+)
Gene ID: Rep_439_c_4_1082
Type: CAZyme
Location: 1327050 - 1330904 (-)
Type: CAZyme
Location: 1327050 - 1330904 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Paraprevotella
Species
Paraprevotella sp905215575
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.