Cluster: Rep_439_CGC41
🧬 Cluster Details
- Gene Count: 17
- CAZyme Count: 8
- Substrate:
- Genome ID: Rep_439
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_439_c_4 | Rep_439_c_4_887 | 1067965 | 1069251 | + | 2.A.40.7.6 |
| CAZyme | Rep_439_c_4 | Rep_439_c_4_888 | 1069534 | 1072134 | + | CBM51 | GH36 |
| NULL(UNKNOWN) | Rep_439_c_4 | Rep_439_c_4_889 | 1072158 | 1072340 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_439_c_4 | Rep_439_c_4_890 | 1072383 | 1074509 | + | GH89 |
| CAZyme | Rep_439_c_4 | Rep_439_c_4_891 | 1074552 | 1076549 | + | GH20 |
| CAZyme | Rep_439_c_4 | Rep_439_c_4_892 | 1076595 | 1077638 | + | GH29 |
| NULL(UNKNOWN) | Rep_439_c_4 | Rep_439_c_4_893 | 1077818 | 1080295 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_439_c_4 | Rep_439_c_4_894 | 1080516 | 1082135 | + | DUF6377 |
| CAZyme | Rep_439_c_4 | Rep_439_c_4_895 | 1082336 | 1084585 | + | GH31_16 |
| pfam | Rep_439_c_4 | Rep_439_c_4_896 | 1084676 | 1085890 | - | ROK | HTH_24 |
| CAZyme | Rep_439_c_4 | Rep_439_c_4_897 | 1086050 | 1089379 | - | GH20 |
| NULL(UNKNOWN) | Rep_439_c_4 | Rep_439_c_4_898 | 1089422 | 1089592 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | Rep_439_c_4 | Rep_439_c_4_899 | 1089540 | 1089656 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_439_c_4 | Rep_439_c_4_900 | 1089675 | 1095572 | - | GH33 |
| pfam | Rep_439_c_4 | Rep_439_c_4_901 | 1096111 | 1097133 | - | LPG_synthase_TM |
| CAZyme | Rep_439_c_4 | Rep_439_c_4_902 | 1097143 | 1098288 | - | GT4 |
| TC | Rep_439_c_4 | Rep_439_c_4_903 | 1098458 | 1099906 | - | 2.A.47.1.12 |
Gene ID: Rep_439_c_4_887
Type: TC
Location: 1067965 - 1069251 (+)
Type: TC
Location: 1067965 - 1069251 (+)
Gene ID: Rep_439_c_4_888
Type: CAZyme
Location: 1069534 - 1072134 (+)
Type: CAZyme
Location: 1069534 - 1072134 (+)
Gene ID: Rep_439_c_4_889
Type:
Location: 1072158 - 1072340 (-)
Type:
Location: 1072158 - 1072340 (-)
Gene ID: Rep_439_c_4_890
Type: CAZyme
Location: 1072383 - 1074509 (+)
Type: CAZyme
Location: 1072383 - 1074509 (+)
Gene ID: Rep_439_c_4_891
Type: CAZyme
Location: 1074552 - 1076549 (+)
Type: CAZyme
Location: 1074552 - 1076549 (+)
Gene ID: Rep_439_c_4_892
Type: CAZyme
Location: 1076595 - 1077638 (+)
Type: CAZyme
Location: 1076595 - 1077638 (+)
Gene ID: Rep_439_c_4_893
Type:
Location: 1077818 - 1080295 (-)
Type:
Location: 1077818 - 1080295 (-)
Gene ID: Rep_439_c_4_894
Type: pfam
Location: 1080516 - 1082135 (+)
Type: pfam
Location: 1080516 - 1082135 (+)
Gene ID: Rep_439_c_4_895
Type: CAZyme
Location: 1082336 - 1084585 (+)
Type: CAZyme
Location: 1082336 - 1084585 (+)
Gene ID: Rep_439_c_4_896
Type: pfam
Location: 1084676 - 1085890 (-)
Type: pfam
Location: 1084676 - 1085890 (-)
Gene ID: Rep_439_c_4_897
Type: CAZyme
Location: 1086050 - 1089379 (-)
Type: CAZyme
Location: 1086050 - 1089379 (-)
Gene ID: Rep_439_c_4_898
Type:
Location: 1089422 - 1089592 (-)
Type:
Location: 1089422 - 1089592 (-)
Gene ID: Rep_439_c_4_899
Type:
Location: 1089540 - 1089656 (-)
Type:
Location: 1089540 - 1089656 (-)
Gene ID: Rep_439_c_4_900
Type: CAZyme
Location: 1089675 - 1095572 (-)
Type: CAZyme
Location: 1089675 - 1095572 (-)
Gene ID: Rep_439_c_4_901
Type: pfam
Location: 1096111 - 1097133 (-)
Type: pfam
Location: 1096111 - 1097133 (-)
Gene ID: Rep_439_c_4_902
Type: CAZyme
Location: 1097143 - 1098288 (-)
Type: CAZyme
Location: 1097143 - 1098288 (-)
Gene ID: Rep_439_c_4_903
Type: TC
Location: 1098458 - 1099906 (-)
Type: TC
Location: 1098458 - 1099906 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Paraprevotella
Species
Paraprevotella sp905215575
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.