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Cluster: Rep_439_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_439_c_4 Rep_439_c_4_92 108611 109804 + GH109
STP Rep_439_c_4 Rep_439_c_4_93 109834 110652 + PfkB
pfam Rep_439_c_4 Rep_439_c_4_94 110704 111597 + Acyl_transf_1
CAZyme Rep_439_c_4 Rep_439_c_4_95 111675 113354 + GH13_38
NULL(UNKNOWN) Rep_439_c_4 Rep_439_c_4_96 113575 113697 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_439_c_4 Rep_439_c_4_97 119534 120904 + 2.A.25.1.3
NULL(UNKNOWN) Rep_439_c_4 Rep_439_c_4_98 120974 121333 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_439_c_4 Rep_439_c_4_99 121427 124276 - 1.B.42.1.8
Gene ID: Rep_439_c_4_92
Type: CAZyme
Location: 108611 - 109804 (+)
Gene ID: Rep_439_c_4_93
Type: STP
Location: 109834 - 110652 (+)
Gene ID: Rep_439_c_4_94
Type: pfam
Location: 110704 - 111597 (+)
Gene ID: Rep_439_c_4_95
Type: CAZyme
Location: 111675 - 113354 (+)
Gene ID: Rep_439_c_4_96
Type:
Location: 113575 - 113697 (-)
Gene ID: Rep_439_c_4_97
Type: TC
Location: 119534 - 120904 (+)
Gene ID: Rep_439_c_4_98
Type:
Location: 120974 - 121333 (+)
Gene ID: Rep_439_c_4_99
Type: TC
Location: 121427 - 124276 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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