dbCAN Logo

Cluster: Rep_439_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_439_c_4 Rep_439_c_4_4 3348 5411 - GH20
STP Rep_439_c_4 Rep_439_c_4_5 5466 6110 - Nitroreductase
TC Rep_439_c_4 Rep_439_c_4_6 6229 7020 - 2.A.5.5.5
pfam Rep_439_c_4 Rep_439_c_4_7 7313 8572 + OEP | OEP
TC Rep_439_c_4 Rep_439_c_4_8 8593 9522 + 3.A.1.105.4
TC Rep_439_c_4 Rep_439_c_4_9 9519 10643 + 3.A.1.105.15
TC Rep_439_c_4 Rep_439_c_4_10 10732 11829 + 3.A.1.105.15
Gene ID: Rep_439_c_4_4
Type: CAZyme
Location: 3348 - 5411 (-)
Gene ID: Rep_439_c_4_5
Type: STP
Location: 5466 - 6110 (-)
Gene ID: Rep_439_c_4_6
Type: TC
Location: 6229 - 7020 (-)
Gene ID: Rep_439_c_4_7
Type: pfam
Location: 7313 - 8572 (+)
Gene ID: Rep_439_c_4_8
Type: TC
Location: 8593 - 9522 (+)
Gene ID: Rep_439_c_4_9
Type: TC
Location: 9519 - 10643 (+)
Gene ID: Rep_439_c_4_10
Type: TC
Location: 10732 - 11829 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List