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Cluster: Rep_439_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_439_c_3 Rep_439_c_3_624 801744 802460 + GT2
CAZyme Rep_439_c_3 Rep_439_c_3_625 802715 803842 - GT4
CAZyme Rep_439_c_3 Rep_439_c_3_626 803811 804929 - GT4
CAZyme Rep_439_c_3 Rep_439_c_3_627 804926 805810 - GT2
CAZyme Rep_439_c_3 Rep_439_c_3_628 805807 806694 - GT2
TC Rep_439_c_3 Rep_439_c_3_629 806725 807768 - 9.B.183.1.5
pfam Rep_439_c_3 Rep_439_c_3_630 807803 808846 - Wzz
TC Rep_439_c_3 Rep_439_c_3_631 808856 811363 - 1.B.18.1.2
TC Rep_439_c_3 Rep_439_c_3_632 811370 811975 - 9.B.18.1.3
Gene ID: Rep_439_c_3_624
Type: CAZyme
Location: 801744 - 802460 (+)
Gene ID: Rep_439_c_3_625
Type: CAZyme
Location: 802715 - 803842 (-)
Gene ID: Rep_439_c_3_626
Type: CAZyme
Location: 803811 - 804929 (-)
Gene ID: Rep_439_c_3_627
Type: CAZyme
Location: 804926 - 805810 (-)
Gene ID: Rep_439_c_3_628
Type: CAZyme
Location: 805807 - 806694 (-)
Gene ID: Rep_439_c_3_629
Type: TC
Location: 806725 - 807768 (-)
Gene ID: Rep_439_c_3_630
Type: pfam
Location: 807803 - 808846 (-)
Gene ID: Rep_439_c_3_631
Type: TC
Location: 808856 - 811363 (-)
Gene ID: Rep_439_c_3_632
Type: TC
Location: 811370 - 811975 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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