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Cluster: Rep_439_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_439_c_3 Rep_439_c_3_584 749198 751669 + 8.A.3.3.4
pfam Rep_439_c_3 Rep_439_c_3_585 752212 753561 + Polysacc_synt
CAZyme Rep_439_c_3 Rep_439_c_3_586 753566 754723 + GT4
CAZyme Rep_439_c_3 Rep_439_c_3_587 754684 755454 + GT32
pfam Rep_439_c_3 Rep_439_c_3_588 755454 756521 + EpsG
CAZyme Rep_439_c_3 Rep_439_c_3_589 756518 757495 + GT2
pfam Rep_439_c_3 Rep_439_c_3_590 757498 758496 + PS_pyruv_trans
CAZyme Rep_439_c_3 Rep_439_c_3_591 758517 759677 + GT4
CAZyme Rep_439_c_3 Rep_439_c_3_592 759710 760429 + GT26
Gene ID: Rep_439_c_3_584
Type: TC
Location: 749198 - 751669 (+)
Gene ID: Rep_439_c_3_585
Type: pfam
Location: 752212 - 753561 (+)
Gene ID: Rep_439_c_3_586
Type: CAZyme
Location: 753566 - 754723 (+)
Gene ID: Rep_439_c_3_587
Type: CAZyme
Location: 754684 - 755454 (+)
Gene ID: Rep_439_c_3_588
Type: pfam
Location: 755454 - 756521 (+)
Gene ID: Rep_439_c_3_589
Type: CAZyme
Location: 756518 - 757495 (+)
Gene ID: Rep_439_c_3_590
Type: pfam
Location: 757498 - 758496 (+)
Gene ID: Rep_439_c_3_591
Type: CAZyme
Location: 758517 - 759677 (+)
Gene ID: Rep_439_c_3_592
Type: CAZyme
Location: 759710 - 760429 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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