Cluster: Rep_439_CGC12
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_439
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_439_c_3 | Rep_439_c_3_472 | 596453 | 599230 | - | 1.C.105.2.12 |
| pfam | Rep_439_c_3 | Rep_439_c_3_473 | 599447 | 602266 | + | ABC_tran | UvrA_DNA-bind | UvrA_inter |
| pfam | Rep_439_c_3 | Rep_439_c_3_474 | 602349 | 603713 | - | Glyco_hydro_101 |
| CAZyme | Rep_439_c_3 | Rep_439_c_3_475 | 603750 | 605438 | - | GH110 |
| TC | Rep_439_c_3 | Rep_439_c_3_476 | 605640 | 606305 | + | 2.A.88.8.4 |
Gene ID: Rep_439_c_3_472
Type: TC
Location: 596453 - 599230 (-)
Type: TC
Location: 596453 - 599230 (-)
Gene ID: Rep_439_c_3_473
Type: pfam
Location: 599447 - 602266 (+)
Type: pfam
Location: 599447 - 602266 (+)
Gene ID: Rep_439_c_3_474
Type: pfam
Location: 602349 - 603713 (-)
Type: pfam
Location: 602349 - 603713 (-)
Gene ID: Rep_439_c_3_475
Type: CAZyme
Location: 603750 - 605438 (-)
Type: CAZyme
Location: 603750 - 605438 (-)
Gene ID: Rep_439_c_3_476
Type: TC
Location: 605640 - 606305 (+)
Type: TC
Location: 605640 - 606305 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Paraprevotella
Species
Paraprevotella sp905215575
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.