dbCAN HGM

Cluster: Rep_427_CGC35

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	Rep_427_c_8	Rep_427_c_8_8	16605	17981	-	GH43
STP	Rep_427_c_8	Rep_427_c_8_9	18027	20057	-	HD
TC	Rep_427_c_8	Rep_427_c_8_10	20341	21744	+	2.A.1.3.17
STP	Rep_427_c_8	Rep_427_c_8_11	21774	24185	-	HD
pfam	Rep_427_c_8	Rep_427_c_8_12	24221	25219	-	PFK
CAZyme	Rep_427_c_8	Rep_427_c_8_13	25585	27009	-	PL1

Gene ID: Rep_427_c_8_8
Type: CAZyme
Location: 16605 - 17981 (-)

Gene ID: Rep_427_c_8_9
Type: STP
Location: 18027 - 20057 (-)

Gene ID: Rep_427_c_8_10
Type: TC
Location: 20341 - 21744 (+)

Gene ID: Rep_427_c_8_11
Type: STP
Location: 21774 - 24185 (-)

Gene ID: Rep_427_c_8_12
Type: pfam
Location: 24221 - 25219 (-)

Gene ID: Rep_427_c_8_13
Type: CAZyme
Location: 25585 - 27009 (-)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
Rep_427_c_8_8	vegan > omnivore	2.84714	0.00875
Rep_427_c_8_9	vegetarian > vegan	1.47461	0.00367
Rep_427_c_8_10	vegetarian > vegan	2.42898	0.00367
Rep_427_c_8_11	vegetarian > omnivore	1.46474	0.03333
Rep_427_c_8_11	vegetarian > vegan	1.31775	0.00367
Rep_427_c_8_13	vegetarian > vegan	2.27372	0.00367