dbCAN HGM

Cluster: Rep_427_CGC30

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	Rep_427_c_5	Rep_427_c_5_22	23568	26750	+	1.B.14.6.1
TC	Rep_427_c_5	Rep_427_c_5_23	26779	28629	+	8.A.46.1.6
NULL(UNKNOWN)	Rep_427_c_5	Rep_427_c_5_24	28667	29164	+	NULL(UNKNOWN) [View Structural Homologs]
CAZyme	Rep_427_c_5	Rep_427_c_5_25	29454	32921	+	PL1_2
pfam	Rep_427_c_5	Rep_427_c_5_26	33222	36329	-	Metallophos \| Pur_ac_phosph_N \| PKD_6
NULL(UNKNOWN)	Rep_427_c_5	Rep_427_c_5_27	36345	36551	-	NULL(UNKNOWN) [View Structural Homologs]
CAZyme	Rep_427_c_5	Rep_427_c_5_28	36686	38404	+	GT3
CAZyme	Rep_427_c_5	Rep_427_c_5_29	38428	40983	+	GT35

Gene ID: Rep_427_c_5_22
Type: TC
Location: 23568 - 26750 (+)

Gene ID: Rep_427_c_5_23
Type: TC
Location: 26779 - 28629 (+)

Gene ID: Rep_427_c_5_24
Type:
Location: 28667 - 29164 (+)

Gene ID: Rep_427_c_5_25
Type: CAZyme
Location: 29454 - 32921 (+)

Gene ID: Rep_427_c_5_26
Type: pfam
Location: 33222 - 36329 (-)

Gene ID: Rep_427_c_5_27
Type:
Location: 36345 - 36551 (-)

Gene ID: Rep_427_c_5_28
Type: CAZyme
Location: 36686 - 38404 (+)

Gene ID: Rep_427_c_5_29
Type: CAZyme
Location: 38428 - 40983 (+)

Taxonomic Lineage

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Species

Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
Rep_427_c_5_25	vegetarian > vegan	1.79268	0.00367
Rep_427_c_5_26	vegetarian > vegan	2.10709	0.00367
Rep_427_c_5_28	vegetarian > vegan	1.43817	0.00367
Rep_427_c_5_29	vegan > omnivore	1.33993	0.00229