dbCAN HGM

Cluster: Rep_427_CGC2

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	Rep_427_c_0	Rep_427_c_0_83	77972	79573	+	GH23
CAZyme	Rep_427_c_0	Rep_427_c_0_84	79682	81325	+	CE12 \| CE8
CAZyme	Rep_427_c_0	Rep_427_c_0_85	81341	83089	+	GH105
CAZyme	Rep_427_c_0	Rep_427_c_0_86	83096	84325	+	GH105
pfam	Rep_427_c_0	Rep_427_c_0_87	84493	84696	+	DUF2582
CAZyme	Rep_427_c_0	Rep_427_c_0_88	84815	85840	+	CE8
CAZyme	Rep_427_c_0	Rep_427_c_0_89	85884	87554	+	CBM91 \| GH43_10
pfam	Rep_427_c_0	Rep_427_c_0_90	87626	88816	+	ATP-grasp \| CPSase_L_D2 \| Dala_Dala_lig_C \| PurT_C \| RS_preATP-grasp-like
TC	Rep_427_c_0	Rep_427_c_0_91	88909	90015	-	3.A.1.132.3

Gene ID: Rep_427_c_0_83
Type: CAZyme
Location: 77972 - 79573 (+)

Gene ID: Rep_427_c_0_84
Type: CAZyme
Location: 79682 - 81325 (+)

Gene ID: Rep_427_c_0_85
Type: CAZyme
Location: 81341 - 83089 (+)

Gene ID: Rep_427_c_0_86
Type: CAZyme
Location: 83096 - 84325 (+)

Gene ID: Rep_427_c_0_87
Type: pfam
Location: 84493 - 84696 (+)

Gene ID: Rep_427_c_0_88
Type: CAZyme
Location: 84815 - 85840 (+)

Gene ID: Rep_427_c_0_89
Type: CAZyme
Location: 85884 - 87554 (+)

Gene ID: Rep_427_c_0_90
Type: pfam
Location: 87626 - 88816 (+)

Gene ID: Rep_427_c_0_91
Type: TC
Location: 88909 - 90015 (-)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
Rep_427_c_0_83	vegetarian > vegan	2.51230	0.00367
Rep_427_c_0_84	vegetarian > vegan	1.83571	0.00367
Rep_427_c_0_85	vegetarian > vegan	2.45650	0.00367
Rep_427_c_0_86	vegetarian > vegan	3.12321	0.00367
Rep_427_c_0_87	vegetarian > vegan	3.81345	0.00367
Rep_427_c_0_88	vegetarian > vegan	3.04315	0.00367
Rep_427_c_0_89	vegetarian > vegan	1.62806	0.00367
Rep_427_c_0_90	vegetarian > vegan	2.28367	0.00367