Cluster: Rep_427_CGC17
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_427
- CGC Family ID: CGCFAM_09605
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_427_c_1 | Rep_427_c_1_371 | 449083 | 449751 | + | 9.B.20.1.4 |
| NULL(UNKNOWN) | Rep_427_c_1 | Rep_427_c_1_372 | 449756 | 449848 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | Rep_427_c_1 | Rep_427_c_1_373 | 449999 | 450181 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_427_c_1 | Rep_427_c_1_374 | 450323 | 452521 | + | 3.A.3.5.15 |
| STP | Rep_427_c_1 | Rep_427_c_1_375 | 452543 | 452752 | + | HMA |
| pfam | Rep_427_c_1 | Rep_427_c_1_376 | 453030 | 454634 | + | AhpC-TSA | Redoxin | Thioredoxin_8 |
| CAZyme | Rep_427_c_1 | Rep_427_c_1_377 | 454780 | 455937 | + | PL10_1 |
Gene ID: Rep_427_c_1_371
Type: TC
Location: 449083 - 449751 (+)
Type: TC
Location: 449083 - 449751 (+)
Gene ID: Rep_427_c_1_372
Type:
Location: 449756 - 449848 (+)
Type:
Location: 449756 - 449848 (+)
Gene ID: Rep_427_c_1_373
Type:
Location: 449999 - 450181 (+)
Type:
Location: 449999 - 450181 (+)
Gene ID: Rep_427_c_1_374
Type: TC
Location: 450323 - 452521 (+)
Type: TC
Location: 450323 - 452521 (+)
Gene ID: Rep_427_c_1_375
Type: STP
Location: 452543 - 452752 (+)
Type: STP
Location: 452543 - 452752 (+)
Gene ID: Rep_427_c_1_376
Type: pfam
Location: 453030 - 454634 (+)
Type: pfam
Location: 453030 - 454634 (+)
Gene ID: Rep_427_c_1_377
Type: CAZyme
Location: 454780 - 455937 (+)
Type: CAZyme
Location: 454780 - 455937 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
UBA11471
Genus
Caccoplasma
Species
Caccoplasma sp900547555
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_427_c_1_371 | vegetarian > vegan | 1.42217 | 0.00367 |
| Rep_427_c_1_373 | vegetarian > vegan | 2.70827 | 0.00367 |
| Rep_427_c_1_374 | vegetarian > vegan | 2.72364 | 0.00367 |
| Rep_427_c_1_376 | vegetarian > vegan | 1.59234 | 0.00367 |
| Rep_427_c_1_377 | vegetarian > vegan | 1.41853 | 0.00367 |