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Cluster: Rep_427_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_427_c_1 Rep_427_c_1_119 146648 147289 - 9.B.27.2.3
STP Rep_427_c_1 Rep_427_c_1_120 147370 148602 - TPR_1
pfam Rep_427_c_1 Rep_427_c_1_121 148638 151160 - DNA_topoisoIV | DNA_gyraseA_C | DNA_gyraseA_C | DNA_gyraseA_C | DNA_gyraseA_C | DNA_gyraseA_C | DNA_gyraseA_C
TC Rep_427_c_1 Rep_427_c_1_122 151459 154005 + 3.A.9.1.2
STP Rep_427_c_1 Rep_427_c_1_123 154119 156170 + HATPase_c
CAZyme Rep_427_c_1 Rep_427_c_1_124 156243 159764 - PL1_2
TC Rep_427_c_1 Rep_427_c_1_125 159994 160989 + 8.A.5.1.3
Gene ID: Rep_427_c_1_119
Type: TC
Location: 146648 - 147289 (-)
Gene ID: Rep_427_c_1_120
Type: STP
Location: 147370 - 148602 (-)
Gene ID: Rep_427_c_1_121
Type: pfam
Location: 148638 - 151160 (-)
Gene ID: Rep_427_c_1_122
Type: TC
Location: 151459 - 154005 (+)
Gene ID: Rep_427_c_1_123
Type: STP
Location: 154119 - 156170 (+)
Gene ID: Rep_427_c_1_124
Type: CAZyme
Location: 156243 - 159764 (-)
Gene ID: Rep_427_c_1_125
Type: TC
Location: 159994 - 160989 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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