Cluster: Rep_415_CGC9
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_415
- CGC Family ID: CGCFAM_00576
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_415_c_50 | Rep_415_c_50_3 | 2851 | 5103 | - | GH20 |
| CAZyme | Rep_415_c_50 | Rep_415_c_50_4 | 5125 | 8226 | - | CE20 | CE3 |
| pfam | Rep_415_c_50 | Rep_415_c_50_5 | 8232 | 9425 | - | GlcNAc_2-epim |
| pfam | Rep_415_c_50 | Rep_415_c_50_6 | 9431 | 10354 | - | DHDPS |
| TC | Rep_415_c_50 | Rep_415_c_50_7 | 10499 | 11767 | - | 2.A.1.14.25 |
| CAZyme | Rep_415_c_50 | Rep_415_c_50_8 | 11944 | 13794 | + | GH13_14 |
Gene ID: Rep_415_c_50_3
Type: CAZyme
Location: 2851 - 5103 (-)
Type: CAZyme
Location: 2851 - 5103 (-)
Gene ID: Rep_415_c_50_4
Type: CAZyme
Location: 5125 - 8226 (-)
Type: CAZyme
Location: 5125 - 8226 (-)
Gene ID: Rep_415_c_50_5
Type: pfam
Location: 8232 - 9425 (-)
Type: pfam
Location: 8232 - 9425 (-)
Gene ID: Rep_415_c_50_6
Type: pfam
Location: 9431 - 10354 (-)
Type: pfam
Location: 9431 - 10354 (-)
Gene ID: Rep_415_c_50_7
Type: TC
Location: 10499 - 11767 (-)
Type: TC
Location: 10499 - 11767 (-)
Gene ID: Rep_415_c_50_8
Type: CAZyme
Location: 11944 - 13794 (+)
Type: CAZyme
Location: 11944 - 13794 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
CAG-873
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.