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Cluster: Rep_415_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_415_c_244 Rep_415_c_244_16 16461 18191 - 3.A.18.1.1
CAZyme Rep_415_c_244 Rep_415_c_244_17 18307 20268 - GH20
pfam Rep_415_c_244 Rep_415_c_244_18 20402 20857 - Tyr_Deacylase
TC Rep_415_c_244 Rep_415_c_244_19 20994 22304 - 3.D.5.1.1
TC Rep_415_c_244 Rep_415_c_244_20 22313 22930 - 3.D.5.1.1
TC Rep_415_c_244 Rep_415_c_244_21 22953 23576 - 3.D.5.1.1
TC Rep_415_c_244 Rep_415_c_244_22 23579 24295 - 3.D.5.1.1
TC Rep_415_c_244 Rep_415_c_244_23 24292 25512 - 3.D.5.1.1
Gene ID: Rep_415_c_244_16
Type: TC
Location: 16461 - 18191 (-)
Gene ID: Rep_415_c_244_17
Type: CAZyme
Location: 18307 - 20268 (-)
Gene ID: Rep_415_c_244_18
Type: pfam
Location: 20402 - 20857 (-)
Gene ID: Rep_415_c_244_19
Type: TC
Location: 20994 - 22304 (-)
Gene ID: Rep_415_c_244_20
Type: TC
Location: 22313 - 22930 (-)
Gene ID: Rep_415_c_244_21
Type: TC
Location: 22953 - 23576 (-)
Gene ID: Rep_415_c_244_22
Type: TC
Location: 23579 - 24295 (-)
Gene ID: Rep_415_c_244_23
Type: TC
Location: 24292 - 25512 (-)

Taxonomic Lineage

Domain
Bacteria
Genus
CAG-873

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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