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Cluster: Rep_410_CGC38

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_410_c_173 Rep_410_c_173_1 87 2003 - GH43_4
pfam Rep_410_c_173 Rep_410_c_173_2 2079 3866 - SusD_RagB | SusD-like_3
TC Rep_410_c_173 Rep_410_c_173_3 3880 7113 - 1.B.14.6.1
pfam Rep_410_c_173 Rep_410_c_173_4 7148 8914 - SusD_RagB | SusD-like_3
TC Rep_410_c_173 Rep_410_c_173_5 8934 12059 - 1.B.14.6.1
pfam Rep_410_c_173 Rep_410_c_173_6 12091 13929 - Laminin_G_3
TF Rep_410_c_173 Rep_410_c_173_7 14127 18374 - HTH_AraC
CAZyme Rep_410_c_173 Rep_410_c_173_8 18768 20150 + GH43_4
CAZyme Rep_410_c_173 Rep_410_c_173_9 20199 22205 + GH51_2
CAZyme Rep_410_c_173 Rep_410_c_173_10 22218 23756 + GH51_1
Gene ID: Rep_410_c_173_1
Type: CAZyme
Location: 87 - 2003 (-)
Gene ID: Rep_410_c_173_2
Type: pfam
Location: 2079 - 3866 (-)
Gene ID: Rep_410_c_173_3
Type: TC
Location: 3880 - 7113 (-)
Gene ID: Rep_410_c_173_4
Type: pfam
Location: 7148 - 8914 (-)
Gene ID: Rep_410_c_173_5
Type: TC
Location: 8934 - 12059 (-)
Gene ID: Rep_410_c_173_6
Type: pfam
Location: 12091 - 13929 (-)
Gene ID: Rep_410_c_173_7
Type: TF
Location: 14127 - 18374 (-)
Gene ID: Rep_410_c_173_8
Type: CAZyme
Location: 18768 - 20150 (+)
Gene ID: Rep_410_c_173_9
Type: CAZyme
Location: 20199 - 22205 (+)
Gene ID: Rep_410_c_173_10
Type: CAZyme
Location: 22218 - 23756 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Duncaniella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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