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Cluster: Rep_410_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_410_c_108 Rep_410_c_108_5 4680 8108 + 1.B.14.6.1
pfam Rep_410_c_108 Rep_410_c_108_6 8163 9782 + SusD_RagB | SusD-like_3
CAZyme Rep_410_c_108 Rep_410_c_108_7 9809 10819 + GH43_18
NULL(UNKNOWN) Rep_410_c_108 Rep_410_c_108_8 10822 12909 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_410_c_108 Rep_410_c_108_9 13044 15326 + GH3
NULL(UNKNOWN) Rep_410_c_108 Rep_410_c_108_10 15340 15483 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_410_c_108 Rep_410_c_108_11 15504 16472 + GH43_17
NULL(UNKNOWN) Rep_410_c_108 Rep_410_c_108_12 16608 18410 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_410_c_108 Rep_410_c_108_13 18537 20360 + GH36
Gene ID: Rep_410_c_108_5
Type: TC
Location: 4680 - 8108 (+)
Gene ID: Rep_410_c_108_6
Type: pfam
Location: 8163 - 9782 (+)
Gene ID: Rep_410_c_108_7
Type: CAZyme
Location: 9809 - 10819 (+)
Gene ID: Rep_410_c_108_8
Type:
Location: 10822 - 12909 (+)
Gene ID: Rep_410_c_108_9
Type: CAZyme
Location: 13044 - 15326 (+)
Gene ID: Rep_410_c_108_10
Type:
Location: 15340 - 15483 (+)
Gene ID: Rep_410_c_108_11
Type: CAZyme
Location: 15504 - 16472 (+)
Gene ID: Rep_410_c_108_12
Type:
Location: 16608 - 18410 (+)
Gene ID: Rep_410_c_108_13
Type: CAZyme
Location: 18537 - 20360 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Duncaniella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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