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Cluster: Rep_410_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_410_c_68 Rep_410_c_68_2 960 2609 - GH5_4
NULL(UNKNOWN) Rep_410_c_68 Rep_410_c_68_3 2698 4815 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) Rep_410_c_68 Rep_410_c_68_4 4838 6679 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_410_c_68 Rep_410_c_68_5 6724 8409 - 8.A.46.1.2
TC Rep_410_c_68 Rep_410_c_68_6 8439 11618 - 1.B.14.6.1
TF Rep_410_c_68 Rep_410_c_68_7 11969 16117 + HTH_AraC | HTH_AraC
CAZyme Rep_410_c_68 Rep_410_c_68_8 16256 19138 + GH31_4
CAZyme Rep_410_c_68 Rep_410_c_68_9 19144 21660 + GH2
CAZyme Rep_410_c_68 Rep_410_c_68_10 21657 23873 + GH3
Gene ID: Rep_410_c_68_2
Type: CAZyme
Location: 960 - 2609 (-)
Gene ID: Rep_410_c_68_3
Type:
Location: 2698 - 4815 (-)
Gene ID: Rep_410_c_68_4
Type:
Location: 4838 - 6679 (-)
Gene ID: Rep_410_c_68_5
Type: TC
Location: 6724 - 8409 (-)
Gene ID: Rep_410_c_68_6
Type: TC
Location: 8439 - 11618 (-)
Gene ID: Rep_410_c_68_7
Type: TF
Location: 11969 - 16117 (+)
Gene ID: Rep_410_c_68_8
Type: CAZyme
Location: 16256 - 19138 (+)
Gene ID: Rep_410_c_68_9
Type: CAZyme
Location: 19144 - 21660 (+)
Gene ID: Rep_410_c_68_10
Type: CAZyme
Location: 21657 - 23873 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Duncaniella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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