Cluster: Rep_40_CGC6
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_40
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_40_c_7 | Rep_40_c_7_49 | 55669 | 57540 | + | GH39 |
| pfam | Rep_40_c_7 | Rep_40_c_7_50 | 57784 | 58857 | - | Radical_SAM |
| NULL(UNKNOWN) | Rep_40_c_7 | Rep_40_c_7_51 | 58859 | 59104 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_40_c_7 | Rep_40_c_7_52 | 59108 | 60160 | - | 9.A.40.1.2 |
| CAZyme | Rep_40_c_7 | Rep_40_c_7_53 | 60378 | 61784 | + | GH109 |
Gene ID: Rep_40_c_7_49
Type: CAZyme
Location: 55669 - 57540 (+)
Type: CAZyme
Location: 55669 - 57540 (+)
Gene ID: Rep_40_c_7_50
Type: pfam
Location: 57784 - 58857 (-)
Type: pfam
Location: 57784 - 58857 (-)
Gene ID: Rep_40_c_7_51
Type:
Location: 58859 - 59104 (-)
Type:
Location: 58859 - 59104 (-)
Gene ID: Rep_40_c_7_52
Type: TC
Location: 59108 - 60160 (-)
Type: TC
Location: 59108 - 60160 (-)
Gene ID: Rep_40_c_7_53
Type: CAZyme
Location: 60378 - 61784 (+)
Type: CAZyme
Location: 60378 - 61784 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Opitutales
Family
CAG-312
Genus
Merdousia
Species
Merdousia sp944389175
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.