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Cluster: Rep_40_CGC33

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_40_c_34 Rep_40_c_34_92 113437 114867 - 3.D.1.1.1
TC Rep_40_c_34 Rep_40_c_34_93 114871 116367 - 3.D.1.5.1
TC Rep_40_c_34 Rep_40_c_34_94 116377 118284 - 3.D.1.5.1
TC Rep_40_c_34 Rep_40_c_34_95 118290 118595 - 3.D.1.8.1
pfam Rep_40_c_34 Rep_40_c_34_96 118607 119122 - Oxidored_q3
TC Rep_40_c_34 Rep_40_c_34_97 119122 119646 - 3.D.1.6.3
TC Rep_40_c_34 Rep_40_c_34_98 119652 120761 - 3.D.1.5.1
TC Rep_40_c_34 Rep_40_c_34_99 120766 122442 - 3.D.1.6.4
TC Rep_40_c_34 Rep_40_c_34_100 122448 123809 - 3.D.1.6.3
TC Rep_40_c_34 Rep_40_c_34_101 123813 124364 - 3.D.1.6.2
TC Rep_40_c_34 Rep_40_c_34_102 124375 125592 - 3.D.1.5.1
TC Rep_40_c_34 Rep_40_c_34_103 125604 126218 - 3.D.1.5.1
TC Rep_40_c_34 Rep_40_c_34_104 126229 126738 - 3.D.1.5.1
CAZyme Rep_40_c_34 Rep_40_c_34_105 127297 129099 - GH129
Gene ID: Rep_40_c_34_92
Type: TC
Location: 113437 - 114867 (-)
Gene ID: Rep_40_c_34_93
Type: TC
Location: 114871 - 116367 (-)
Gene ID: Rep_40_c_34_94
Type: TC
Location: 116377 - 118284 (-)
Gene ID: Rep_40_c_34_95
Type: TC
Location: 118290 - 118595 (-)
Gene ID: Rep_40_c_34_96
Type: pfam
Location: 118607 - 119122 (-)
Gene ID: Rep_40_c_34_97
Type: TC
Location: 119122 - 119646 (-)
Gene ID: Rep_40_c_34_98
Type: TC
Location: 119652 - 120761 (-)
Gene ID: Rep_40_c_34_99
Type: TC
Location: 120766 - 122442 (-)
Gene ID: Rep_40_c_34_100
Type: TC
Location: 122448 - 123809 (-)
Gene ID: Rep_40_c_34_101
Type: TC
Location: 123813 - 124364 (-)
Gene ID: Rep_40_c_34_102
Type: TC
Location: 124375 - 125592 (-)
Gene ID: Rep_40_c_34_103
Type: TC
Location: 125604 - 126218 (-)
Gene ID: Rep_40_c_34_104
Type: TC
Location: 126229 - 126738 (-)
Gene ID: Rep_40_c_34_105
Type: CAZyme
Location: 127297 - 129099 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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