Cluster: Rep_40_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_40
- CGC Family ID: CGCFAM_07441
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_40_c_2 | Rep_40_c_2_96 | 121789 | 123558 | - | GH129 |
| pfam | Rep_40_c_2 | Rep_40_c_2_97 | 123766 | 125592 | - | tRNA-synt_2b | HGTP_anticodon | tRNA_SAD |
| TC | Rep_40_c_2 | Rep_40_c_2_98 | 125738 | 126367 | - | 2.A.76.1.7 |
| CAZyme | Rep_40_c_2 | Rep_40_c_2_99 | 126381 | 128129 | - | GH20 |
Gene ID: Rep_40_c_2_96
Type: CAZyme
Location: 121789 - 123558 (-)
Type: CAZyme
Location: 121789 - 123558 (-)
Gene ID: Rep_40_c_2_97
Type: pfam
Location: 123766 - 125592 (-)
Type: pfam
Location: 123766 - 125592 (-)
Gene ID: Rep_40_c_2_98
Type: TC
Location: 125738 - 126367 (-)
Type: TC
Location: 125738 - 126367 (-)
Gene ID: Rep_40_c_2_99
Type: CAZyme
Location: 126381 - 128129 (-)
Type: CAZyme
Location: 126381 - 128129 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Opitutales
Family
CAG-312
Genus
Merdousia
Species
Merdousia sp944389175
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.