Cluster: Rep_40_CGC28
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_40
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_40_c_32 | Rep_40_c_32_49 | 69015 | 69398 | + | 3.D.1.2.1 |
| pfam | Rep_40_c_32 | Rep_40_c_32_50 | 69402 | 70772 | + | PTS_EIIA_2 | DAC | DacZ_P |
| TC | Rep_40_c_32 | Rep_40_c_32_51 | 70850 | 71887 | + | 2.A.109.3.1 |
| CAZyme | Rep_40_c_32 | Rep_40_c_32_52 | 72032 | 74608 | + | GH141 |
| NULL(UNKNOWN) | Rep_40_c_32 | Rep_40_c_32_53 | 74921 | 75184 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_40_c_32 | Rep_40_c_32_54 | 75187 | 75861 | - | 9.B.149.1.11 |
Gene ID: Rep_40_c_32_49
Type: TC
Location: 69015 - 69398 (+)
Type: TC
Location: 69015 - 69398 (+)
Gene ID: Rep_40_c_32_50
Type: pfam
Location: 69402 - 70772 (+)
Type: pfam
Location: 69402 - 70772 (+)
Gene ID: Rep_40_c_32_51
Type: TC
Location: 70850 - 71887 (+)
Type: TC
Location: 70850 - 71887 (+)
Gene ID: Rep_40_c_32_52
Type: CAZyme
Location: 72032 - 74608 (+)
Type: CAZyme
Location: 72032 - 74608 (+)
Gene ID: Rep_40_c_32_53
Type:
Location: 74921 - 75184 (-)
Type:
Location: 74921 - 75184 (-)
Gene ID: Rep_40_c_32_54
Type: TC
Location: 75187 - 75861 (-)
Type: TC
Location: 75187 - 75861 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Opitutales
Family
CAG-312
Genus
Merdousia
Species
Merdousia sp944389175
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.