Cluster: Rep_40_CGC25
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_40
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_40_c_31 | Rep_40_c_31_27 | 31320 | 33677 | + | GH2 |
| TC | Rep_40_c_31 | Rep_40_c_31_28 | 33694 | 34857 | + | 2.A.1.7.17 |
| TF | Rep_40_c_31 | Rep_40_c_31_29 | 34987 | 36003 | - | LacI |
| TC | Rep_40_c_31 | Rep_40_c_31_30 | 36000 | 37121 | - | 9.B.141.1.1 |
Gene ID: Rep_40_c_31_27
Type: CAZyme
Location: 31320 - 33677 (+)
Type: CAZyme
Location: 31320 - 33677 (+)
Gene ID: Rep_40_c_31_28
Type: TC
Location: 33694 - 34857 (+)
Type: TC
Location: 33694 - 34857 (+)
Gene ID: Rep_40_c_31_29
Type: TF
Location: 34987 - 36003 (-)
Type: TF
Location: 34987 - 36003 (-)
Gene ID: Rep_40_c_31_30
Type: TC
Location: 36000 - 37121 (-)
Type: TC
Location: 36000 - 37121 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Opitutales
Family
CAG-312
Genus
Merdousia
Species
Merdousia sp944389175
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.