Cluster: Rep_40_CGC21
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_40
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_40_c_27 | Rep_40_c_27_1 | 1 | 1404 | + | GH10 |
| TF | Rep_40_c_27 | Rep_40_c_27_2 | 1413 | 2510 | + | LacI |
| TC | Rep_40_c_27 | Rep_40_c_27_3 | 2514 | 3761 | + | 2.A.1.4.4 |
Gene ID: Rep_40_c_27_1
Type: CAZyme
Location: 1 - 1404 (+)
Type: CAZyme
Location: 1 - 1404 (+)
Gene ID: Rep_40_c_27_2
Type: TF
Location: 1413 - 2510 (+)
Type: TF
Location: 1413 - 2510 (+)
Gene ID: Rep_40_c_27_3
Type: TC
Location: 2514 - 3761 (+)
Type: TC
Location: 2514 - 3761 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Opitutales
Family
CAG-312
Genus
Merdousia
Species
Merdousia sp944389175
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.