Cluster: Rep_40_CGC20
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_40
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_40_c_23 | Rep_40_c_23_18 | 16562 | 17440 | - | 3.A.1.23.5 |
| NULL(UNKNOWN) | Rep_40_c_23 | Rep_40_c_23_19 | 17520 | 17969 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | Rep_40_c_23 | Rep_40_c_23_20 | 18037 | 18792 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_40_c_23 | Rep_40_c_23_21 | 18651 | 20546 | - | GH129 |
Gene ID: Rep_40_c_23_18
Type: TC
Location: 16562 - 17440 (-)
Type: TC
Location: 16562 - 17440 (-)
Gene ID: Rep_40_c_23_19
Type:
Location: 17520 - 17969 (-)
Type:
Location: 17520 - 17969 (-)
Gene ID: Rep_40_c_23_20
Type:
Location: 18037 - 18792 (+)
Type:
Location: 18037 - 18792 (+)
Gene ID: Rep_40_c_23_21
Type: CAZyme
Location: 18651 - 20546 (-)
Type: CAZyme
Location: 18651 - 20546 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Opitutales
Family
CAG-312
Genus
Merdousia
Species
Merdousia sp944389175
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.