Cluster: Rep_40_CGC16
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_40
- CGC Family ID: CGCFAM_05776
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_40_c_20 | Rep_40_c_20_58 | 60488 | 61387 | - | GH129 |
| NULL(UNKNOWN) | Rep_40_c_20 | Rep_40_c_20_59 | 61473 | 61703 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | Rep_40_c_20 | Rep_40_c_20_60 | 61995 | 62261 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_40_c_20 | Rep_40_c_20_61 | 62343 | 64859 | - | 3.A.7.7.1 |
Gene ID: Rep_40_c_20_58
Type: CAZyme
Location: 60488 - 61387 (-)
Type: CAZyme
Location: 60488 - 61387 (-)
Gene ID: Rep_40_c_20_59
Type:
Location: 61473 - 61703 (-)
Type:
Location: 61473 - 61703 (-)
Gene ID: Rep_40_c_20_60
Type:
Location: 61995 - 62261 (+)
Type:
Location: 61995 - 62261 (+)
Gene ID: Rep_40_c_20_61
Type: TC
Location: 62343 - 64859 (-)
Type: TC
Location: 62343 - 64859 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Opitutales
Family
CAG-312
Genus
Merdousia
Species
Merdousia sp944389175
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.