Cluster: Rep_40_CGC15
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_40
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_40_c_20 | Rep_40_c_20_23 | 22038 | 23909 | + | 9.B.18.2.1 |
| CAZyme | Rep_40_c_20 | Rep_40_c_20_24 | 23918 | 26458 | + | GH163 |
| pfam | Rep_40_c_20 | Rep_40_c_20_25 | 26681 | 27022 | + | P-II |
| TC | Rep_40_c_20 | Rep_40_c_20_26 | 27041 | 28363 | + | 1.A.11.2.3 |
| pfam | Rep_40_c_20 | Rep_40_c_20_27 | 28526 | 29410 | + | Gcw_chp |
| NULL(UNKNOWN) | Rep_40_c_20 | Rep_40_c_20_28 | 29619 | 30167 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_40_c_20 | Rep_40_c_20_29 | 30011 | 32473 | - | GT35 |
Gene ID: Rep_40_c_20_23
Type: TC
Location: 22038 - 23909 (+)
Type: TC
Location: 22038 - 23909 (+)
Gene ID: Rep_40_c_20_24
Type: CAZyme
Location: 23918 - 26458 (+)
Type: CAZyme
Location: 23918 - 26458 (+)
Gene ID: Rep_40_c_20_25
Type: pfam
Location: 26681 - 27022 (+)
Type: pfam
Location: 26681 - 27022 (+)
Gene ID: Rep_40_c_20_26
Type: TC
Location: 27041 - 28363 (+)
Type: TC
Location: 27041 - 28363 (+)
Gene ID: Rep_40_c_20_27
Type: pfam
Location: 28526 - 29410 (+)
Type: pfam
Location: 28526 - 29410 (+)
Gene ID: Rep_40_c_20_28
Type:
Location: 29619 - 30167 (+)
Type:
Location: 29619 - 30167 (+)
Gene ID: Rep_40_c_20_29
Type: CAZyme
Location: 30011 - 32473 (-)
Type: CAZyme
Location: 30011 - 32473 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Opitutales
Family
CAG-312
Genus
Merdousia
Species
Merdousia sp944389175
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.