Cluster: Rep_40_CGC14
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_40
- CGC Family ID: CGCFAM_01950
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_40_c_19 | Rep_40_c_19_2 | 535 | 1572 | + | GH33 |
| NULL(UNKNOWN) | Rep_40_c_19 | Rep_40_c_19_3 | 1562 | 2056 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | Rep_40_c_19 | Rep_40_c_19_4 | 2240 | 2932 | - | TetR_N |
| TC | Rep_40_c_19 | Rep_40_c_19_5 | 2943 | 4445 | - | 2.A.6.2.44 |
| TC | Rep_40_c_19 | Rep_40_c_19_6 | 4448 | 7594 | - | 2.A.6.2.16 |
| TC | Rep_40_c_19 | Rep_40_c_19_7 | 7613 | 8734 | - | 2.A.6.2.47 |
Gene ID: Rep_40_c_19_2
Type: CAZyme
Location: 535 - 1572 (+)
Type: CAZyme
Location: 535 - 1572 (+)
Gene ID: Rep_40_c_19_3
Type:
Location: 1562 - 2056 (+)
Type:
Location: 1562 - 2056 (+)
Gene ID: Rep_40_c_19_4
Type: STP
Location: 2240 - 2932 (-)
Type: STP
Location: 2240 - 2932 (-)
Gene ID: Rep_40_c_19_5
Type: TC
Location: 2943 - 4445 (-)
Type: TC
Location: 2943 - 4445 (-)
Gene ID: Rep_40_c_19_6
Type: TC
Location: 4448 - 7594 (-)
Type: TC
Location: 4448 - 7594 (-)
Gene ID: Rep_40_c_19_7
Type: TC
Location: 7613 - 8734 (-)
Type: TC
Location: 7613 - 8734 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Opitutales
Family
CAG-312
Genus
Merdousia
Species
Merdousia sp944389175
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.