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Cluster: Rep_40_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_40_c_16 Rep_40_c_16_81 93520 95826 - 9.A.8.1.6
STP Rep_40_c_16 Rep_40_c_16_82 95831 96103 - FeoA
pfam Rep_40_c_16 Rep_40_c_16_83 96728 98092 + MFS_3 | MFS_1
CAZyme Rep_40_c_16 Rep_40_c_16_84 98478 100004 + CE20
CAZyme Rep_40_c_16 Rep_40_c_16_85 100380 102140 - GH129
TC Rep_40_c_16 Rep_40_c_16_86 102223 103470 - 3.A.11.1.3
TC Rep_40_c_16 Rep_40_c_16_87 103497 105164 - 3.A.15.4.1
TC Rep_40_c_16 Rep_40_c_16_88 105173 106867 - 3.A.15.4.1
TC Rep_40_c_16 Rep_40_c_16_89 106911 109538 - 3.A.6.1.1
Gene ID: Rep_40_c_16_81
Type: TC
Location: 93520 - 95826 (-)
Gene ID: Rep_40_c_16_82
Type: STP
Location: 95831 - 96103 (-)
Gene ID: Rep_40_c_16_83
Type: pfam
Location: 96728 - 98092 (+)
Gene ID: Rep_40_c_16_84
Type: CAZyme
Location: 98478 - 100004 (+)
Gene ID: Rep_40_c_16_85
Type: CAZyme
Location: 100380 - 102140 (-)
Gene ID: Rep_40_c_16_86
Type: TC
Location: 102223 - 103470 (-)
Gene ID: Rep_40_c_16_87
Type: TC
Location: 103497 - 105164 (-)
Gene ID: Rep_40_c_16_88
Type: TC
Location: 105173 - 106867 (-)
Gene ID: Rep_40_c_16_89
Type: TC
Location: 106911 - 109538 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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