Cluster: Rep_40_CGC11
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_40
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_40_c_10 | Rep_40_c_10_19 | 22567 | 23760 | + | 2.A.1.36.3 |
| CAZyme | Rep_40_c_10 | Rep_40_c_10_20 | 23827 | 25635 | + | GH129 |
| CAZyme | Rep_40_c_10 | Rep_40_c_10_21 | 26128 | 28248 | - | GH50 |
| TC | Rep_40_c_10 | Rep_40_c_10_22 | 28627 | 29952 | - | 2.A.66.1.28 |
| CAZyme | Rep_40_c_10 | Rep_40_c_10_23 | 30103 | 32415 | - | GH2 |
Gene ID: Rep_40_c_10_19
Type: TC
Location: 22567 - 23760 (+)
Type: TC
Location: 22567 - 23760 (+)
Gene ID: Rep_40_c_10_20
Type: CAZyme
Location: 23827 - 25635 (+)
Type: CAZyme
Location: 23827 - 25635 (+)
Gene ID: Rep_40_c_10_21
Type: CAZyme
Location: 26128 - 28248 (-)
Type: CAZyme
Location: 26128 - 28248 (-)
Gene ID: Rep_40_c_10_22
Type: TC
Location: 28627 - 29952 (-)
Type: TC
Location: 28627 - 29952 (-)
Gene ID: Rep_40_c_10_23
Type: CAZyme
Location: 30103 - 32415 (-)
Type: CAZyme
Location: 30103 - 32415 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Opitutales
Family
CAG-312
Genus
Merdousia
Species
Merdousia sp944389175
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.