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Cluster: Rep_408_CGC45

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_408_c_177 Rep_408_c_177_15 12746 13324 + 8.A.58.2.7
pfam Rep_408_c_177 Rep_408_c_177_16 13324 13716 + DUF2752
STP Rep_408_c_177 Rep_408_c_177_17 13713 15851 + HD
CAZyme Rep_408_c_177 Rep_408_c_177_18 15864 18191 + GH3
CAZyme Rep_408_c_177 Rep_408_c_177_19 18363 19415 + GT4
pfam Rep_408_c_177 Rep_408_c_177_20 19465 20475 + 3Beta_HSD | Epimerase | GDP_Man_Dehyd
CAZyme Rep_408_c_177 Rep_408_c_177_21 20468 21220 + GT26
pfam Rep_408_c_177 Rep_408_c_177_22 21415 21837 + RseC_MucC
STP Rep_408_c_177 Rep_408_c_177_23 21908 22771 + FeS | Fer4 | Fer4
TC Rep_408_c_177 Rep_408_c_177_24 22783 24126 + 3.D.6.1.2
Gene ID: Rep_408_c_177_15
Type: TC
Location: 12746 - 13324 (+)
Gene ID: Rep_408_c_177_16
Type: pfam
Location: 13324 - 13716 (+)
Gene ID: Rep_408_c_177_17
Type: STP
Location: 13713 - 15851 (+)
Gene ID: Rep_408_c_177_18
Type: CAZyme
Location: 15864 - 18191 (+)
Gene ID: Rep_408_c_177_19
Type: CAZyme
Location: 18363 - 19415 (+)
Gene ID: Rep_408_c_177_20
Type: pfam
Location: 19465 - 20475 (+)
Gene ID: Rep_408_c_177_21
Type: CAZyme
Location: 20468 - 21220 (+)
Gene ID: Rep_408_c_177_22
Type: pfam
Location: 21415 - 21837 (+)
Gene ID: Rep_408_c_177_23
Type: STP
Location: 21908 - 22771 (+)
Gene ID: Rep_408_c_177_24
Type: TC
Location: 22783 - 24126 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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