Cluster: Rep_408_CGC42
🧬 Cluster Details
- Gene Count: 17
- CAZyme Count: 6
- Substrate:
- Genome ID: Rep_408
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_408_c_149 | Rep_408_c_149_9 | 10322 | 10981 | + | 1.A.62.2.1 |
| peptidase | Rep_408_c_149 | Rep_408_c_149_10 | 11107 | 13278 | - | S09.UPA |
| STP | Rep_408_c_149 | Rep_408_c_149_11 | 13322 | 14266 | - | Pribosyltran |
| TC | Rep_408_c_149 | Rep_408_c_149_12 | 14361 | 16010 | - | 2.A.81.1.2 |
| TC | Rep_408_c_149 | Rep_408_c_149_13 | 16159 | 17553 | - | 2.A.66.1.28 |
| pfam | Rep_408_c_149 | Rep_408_c_149_14 | 17784 | 19124 | - | Trigger_N |
| CAZyme | Rep_408_c_149 | Rep_408_c_149_15 | 19253 | 21790 | - | GH13 |
| STP | Rep_408_c_149 | Rep_408_c_149_16 | 21911 | 23374 | - | TPR_1 |
| pfam | Rep_408_c_149 | Rep_408_c_149_17 | 23471 | 25201 | - | tRNA-synt_1c | tRNA-synt_1c_C | tRNA-synt_1c_C2 |
| CAZyme | Rep_408_c_149 | Rep_408_c_149_18 | 25391 | 28690 | - | GH35 | GH43_24 |
| pfam | Rep_408_c_149 | Rep_408_c_149_19 | 28825 | 30831 | - | SusD_RagB | SusD-like_3 |
| TC | Rep_408_c_149 | Rep_408_c_149_20 | 30872 | 34153 | - | 1.B.14.6.1 |
| TF | Rep_408_c_149 | Rep_408_c_149_21 | 34490 | 38542 | + | HTH_AraC |
| CAZyme | Rep_408_c_149 | Rep_408_c_149_22 | 38595 | 39680 | + | GH43_24 |
| CAZyme | Rep_408_c_149 | Rep_408_c_149_23 | 39712 | 42024 | + | GH105 | GH154 |
| CAZyme | Rep_408_c_149 | Rep_408_c_149_24 | 42035 | 44419 | + | PL42 |
| CAZyme | Rep_408_c_149 | Rep_408_c_149_25 | 44423 | 47146 | + | GH43_19 | GH43_29 | GH43_34 |
Gene ID: Rep_408_c_149_9
Type: TC
Location: 10322 - 10981 (+)
Type: TC
Location: 10322 - 10981 (+)
Gene ID: Rep_408_c_149_10
Type: peptidase
Location: 11107 - 13278 (-)
Type: peptidase
Location: 11107 - 13278 (-)
Gene ID: Rep_408_c_149_11
Type: STP
Location: 13322 - 14266 (-)
Type: STP
Location: 13322 - 14266 (-)
Gene ID: Rep_408_c_149_12
Type: TC
Location: 14361 - 16010 (-)
Type: TC
Location: 14361 - 16010 (-)
Gene ID: Rep_408_c_149_13
Type: TC
Location: 16159 - 17553 (-)
Type: TC
Location: 16159 - 17553 (-)
Gene ID: Rep_408_c_149_14
Type: pfam
Location: 17784 - 19124 (-)
Type: pfam
Location: 17784 - 19124 (-)
Gene ID: Rep_408_c_149_15
Type: CAZyme
Location: 19253 - 21790 (-)
Type: CAZyme
Location: 19253 - 21790 (-)
Gene ID: Rep_408_c_149_16
Type: STP
Location: 21911 - 23374 (-)
Type: STP
Location: 21911 - 23374 (-)
Gene ID: Rep_408_c_149_17
Type: pfam
Location: 23471 - 25201 (-)
Type: pfam
Location: 23471 - 25201 (-)
Gene ID: Rep_408_c_149_18
Type: CAZyme
Location: 25391 - 28690 (-)
Type: CAZyme
Location: 25391 - 28690 (-)
Gene ID: Rep_408_c_149_19
Type: pfam
Location: 28825 - 30831 (-)
Type: pfam
Location: 28825 - 30831 (-)
Gene ID: Rep_408_c_149_20
Type: TC
Location: 30872 - 34153 (-)
Type: TC
Location: 30872 - 34153 (-)
Gene ID: Rep_408_c_149_21
Type: TF
Location: 34490 - 38542 (+)
Type: TF
Location: 34490 - 38542 (+)
Gene ID: Rep_408_c_149_22
Type: CAZyme
Location: 38595 - 39680 (+)
Type: CAZyme
Location: 38595 - 39680 (+)
Gene ID: Rep_408_c_149_23
Type: CAZyme
Location: 39712 - 42024 (+)
Type: CAZyme
Location: 39712 - 42024 (+)
Gene ID: Rep_408_c_149_24
Type: CAZyme
Location: 42035 - 44419 (+)
Type: CAZyme
Location: 42035 - 44419 (+)
Gene ID: Rep_408_c_149_25
Type: CAZyme
Location: 44423 - 47146 (+)
Type: CAZyme
Location: 44423 - 47146 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Duncaniella
Species
Duncaniella sp019416285
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.