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Cluster: Rep_408_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_408_c_60 Rep_408_c_60_15 16050 17885 + GH141
CAZyme Rep_408_c_60 Rep_408_c_60_16 17913 20174 + GH31_3
STP Rep_408_c_60 Rep_408_c_60_17 20190 23195 + B12-binding | B12-binding_2
TC Rep_408_c_60 Rep_408_c_60_18 23258 24862 + 2.A.21.3.19
pfam Rep_408_c_60 Rep_408_c_60_19 24933 25874 + DHDPS
TC Rep_408_c_60 Rep_408_c_60_20 25985 27472 + 2.A.21.3.10
TC Rep_408_c_60 Rep_408_c_60_21 27589 28872 + 9.A.40.2.2
CAZyme Rep_408_c_60 Rep_408_c_60_22 29033 31399 + GH146
Gene ID: Rep_408_c_60_15
Type: CAZyme
Location: 16050 - 17885 (+)
Gene ID: Rep_408_c_60_16
Type: CAZyme
Location: 17913 - 20174 (+)
Gene ID: Rep_408_c_60_17
Type: STP
Location: 20190 - 23195 (+)
Gene ID: Rep_408_c_60_18
Type: TC
Location: 23258 - 24862 (+)
Gene ID: Rep_408_c_60_19
Type: pfam
Location: 24933 - 25874 (+)
Gene ID: Rep_408_c_60_20
Type: TC
Location: 25985 - 27472 (+)
Gene ID: Rep_408_c_60_21
Type: TC
Location: 27589 - 28872 (+)
Gene ID: Rep_408_c_60_22
Type: CAZyme
Location: 29033 - 31399 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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