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Cluster: Rep_406_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_406_c_24 Rep_406_c_24_7 7046 7867 - 1.A.30.3.1
TC Rep_406_c_24 Rep_406_c_24_8 8333 9652 + 3.D.5.1.1
TC Rep_406_c_24 Rep_406_c_24_9 9682 10887 + 3.D.5.1.1
TC Rep_406_c_24 Rep_406_c_24_10 10916 11632 + 3.D.5.1.1
TC Rep_406_c_24 Rep_406_c_24_11 11669 12295 + 3.D.5.1.1
TC Rep_406_c_24 Rep_406_c_24_12 12299 12916 + 3.D.5.1.1
TC Rep_406_c_24 Rep_406_c_24_13 12939 14204 + 3.D.5.1.1
CAZyme Rep_406_c_24 Rep_406_c_24_14 14490 15932 + CE20
pfam Rep_406_c_24 Rep_406_c_24_15 16142 17335 - Flavodoxin_1 | Lactamase_B | Lactamase_B_2 | ODP
pfam Rep_406_c_24 Rep_406_c_24_16 17360 17518 - Rubredoxin
CAZyme Rep_406_c_24 Rep_406_c_24_17 17605 19998 - GH31
Gene ID: Rep_406_c_24_7
Type: TC
Location: 7046 - 7867 (-)
Gene ID: Rep_406_c_24_8
Type: TC
Location: 8333 - 9652 (+)
Gene ID: Rep_406_c_24_9
Type: TC
Location: 9682 - 10887 (+)
Gene ID: Rep_406_c_24_10
Type: TC
Location: 10916 - 11632 (+)
Gene ID: Rep_406_c_24_11
Type: TC
Location: 11669 - 12295 (+)
Gene ID: Rep_406_c_24_12
Type: TC
Location: 12299 - 12916 (+)
Gene ID: Rep_406_c_24_13
Type: TC
Location: 12939 - 14204 (+)
Gene ID: Rep_406_c_24_14
Type: CAZyme
Location: 14490 - 15932 (+)
Gene ID: Rep_406_c_24_15
Type: pfam
Location: 16142 - 17335 (-)
Gene ID: Rep_406_c_24_16
Type: pfam
Location: 17360 - 17518 (-)
Gene ID: Rep_406_c_24_17
Type: CAZyme
Location: 17605 - 19998 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Duncaniella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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