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Cluster: Rep_406_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_406_c_23 Rep_406_c_23_2 358 2082 - GH35
CAZyme Rep_406_c_23 Rep_406_c_23_3 2361 4679 - GH10
pfam Rep_406_c_23 Rep_406_c_23_4 4701 6152 - SGBP_B_XBD
pfam Rep_406_c_23 Rep_406_c_23_5 6178 7860 - SusD_RagB | SusD-like_3
TC Rep_406_c_23 Rep_406_c_23_6 7880 11032 - 1.B.14.6.1
TC Rep_406_c_23 Rep_406_c_23_7 11468 13375 - 2.A.16.2.2
pfam Rep_406_c_23 Rep_406_c_23_8 13384 15108 - DHH | DHHA1 | RecJ_OB
NULL(UNKNOWN) Rep_406_c_23 Rep_406_c_23_9 15125 15307 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_406_c_23 Rep_406_c_23_10 15357 16286 - 1.A.23.2.1
Gene ID: Rep_406_c_23_2
Type: CAZyme
Location: 358 - 2082 (-)
Gene ID: Rep_406_c_23_3
Type: CAZyme
Location: 2361 - 4679 (-)
Gene ID: Rep_406_c_23_4
Type: pfam
Location: 4701 - 6152 (-)
Gene ID: Rep_406_c_23_5
Type: pfam
Location: 6178 - 7860 (-)
Gene ID: Rep_406_c_23_6
Type: TC
Location: 7880 - 11032 (-)
Gene ID: Rep_406_c_23_7
Type: TC
Location: 11468 - 13375 (-)
Gene ID: Rep_406_c_23_8
Type: pfam
Location: 13384 - 15108 (-)
Gene ID: Rep_406_c_23_9
Type:
Location: 15125 - 15307 (-)
Gene ID: Rep_406_c_23_10
Type: TC
Location: 15357 - 16286 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Duncaniella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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