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Cluster: Rep_406_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_406_c_155 Rep_406_c_155_4 1437 4022 - GH115
CAZyme Rep_406_c_155 Rep_406_c_155_5 4034 5854 - GH2
CAZyme Rep_406_c_155 Rep_406_c_155_6 5872 8553 - CBM67 | GH78
CAZyme Rep_406_c_155 Rep_406_c_155_7 8596 10059 - GH125
CAZyme Rep_406_c_155 Rep_406_c_155_8 10074 11294 - GH76
TF Rep_406_c_155 Rep_406_c_155_9 11478 15491 - HTH_AraC
TC Rep_406_c_155 Rep_406_c_155_10 16362 19544 + 1.B.14.6.1
TC Rep_406_c_155 Rep_406_c_155_11 19577 21589 + 8.A.46.1.1
NULL(UNKNOWN) Rep_406_c_155 Rep_406_c_155_12 21727 23880 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_406_c_155 Rep_406_c_155_13 23948 26254 + GH78
Gene ID: Rep_406_c_155_4
Type: CAZyme
Location: 1437 - 4022 (-)
Gene ID: Rep_406_c_155_5
Type: CAZyme
Location: 4034 - 5854 (-)
Gene ID: Rep_406_c_155_6
Type: CAZyme
Location: 5872 - 8553 (-)
Gene ID: Rep_406_c_155_7
Type: CAZyme
Location: 8596 - 10059 (-)
Gene ID: Rep_406_c_155_8
Type: CAZyme
Location: 10074 - 11294 (-)
Gene ID: Rep_406_c_155_9
Type: TF
Location: 11478 - 15491 (-)
Gene ID: Rep_406_c_155_10
Type: TC
Location: 16362 - 19544 (+)
Gene ID: Rep_406_c_155_11
Type: TC
Location: 19577 - 21589 (+)
Gene ID: Rep_406_c_155_12
Type:
Location: 21727 - 23880 (+)
Gene ID: Rep_406_c_155_13
Type: CAZyme
Location: 23948 - 26254 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Duncaniella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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