Cluster: Rep_406_CGC21
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 5
- Substrate:
- Genome ID: Rep_406
- CGC Family ID: CGCFAM_01251
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_406_c_108 | Rep_406_c_108_4 | 2416 | 5613 | - | GH35 |
| CAZyme | Rep_406_c_108 | Rep_406_c_108_5 | 5678 | 8638 | - | GH2 |
| CAZyme | Rep_406_c_108 | Rep_406_c_108_6 | 8655 | 11465 | - | GH2 |
| CAZyme | Rep_406_c_108 | Rep_406_c_108_7 | 11462 | 13993 | - | GH115 |
| CAZyme | Rep_406_c_108 | Rep_406_c_108_8 | 13983 | 16790 | - | CE12 | CE12 | CE12 |
| pfam | Rep_406_c_108 | Rep_406_c_108_9 | 16958 | 19162 | - | SusD_RagB | SusD-like_3 |
| TC | Rep_406_c_108 | Rep_406_c_108_10 | 19199 | 20764 | - | 1.B.14.6.1 |
Gene ID: Rep_406_c_108_4
Type: CAZyme
Location: 2416 - 5613 (-)
Type: CAZyme
Location: 2416 - 5613 (-)
Gene ID: Rep_406_c_108_5
Type: CAZyme
Location: 5678 - 8638 (-)
Type: CAZyme
Location: 5678 - 8638 (-)
Gene ID: Rep_406_c_108_6
Type: CAZyme
Location: 8655 - 11465 (-)
Type: CAZyme
Location: 8655 - 11465 (-)
Gene ID: Rep_406_c_108_7
Type: CAZyme
Location: 11462 - 13993 (-)
Type: CAZyme
Location: 11462 - 13993 (-)
Gene ID: Rep_406_c_108_8
Type: CAZyme
Location: 13983 - 16790 (-)
Type: CAZyme
Location: 13983 - 16790 (-)
Gene ID: Rep_406_c_108_9
Type: pfam
Location: 16958 - 19162 (-)
Type: pfam
Location: 16958 - 19162 (-)
Gene ID: Rep_406_c_108_10
Type: TC
Location: 19199 - 20764 (-)
Type: TC
Location: 19199 - 20764 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Duncaniella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.