Cluster: Rep_406_CGC19
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_406
- CGC Family ID: CGCFAM_04108
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_406_c_102 | Rep_406_c_102_24 | 22460 | 23896 | + | 2.A.114.1.4 |
| pfam | Rep_406_c_102 | Rep_406_c_102_25 | 23893 | 24204 | + | DUF4286 |
| pfam | Rep_406_c_102 | Rep_406_c_102_26 | 24264 | 24773 | + | RuvC |
| CAZyme | Rep_406_c_102 | Rep_406_c_102_27 | 24800 | 25534 | - | GT2 |
| pfam | Rep_406_c_102 | Rep_406_c_102_28 | 25754 | 27163 | + | TRAM | tRNA_U5-meth_tr | Methyltransf_31 |
| TC | Rep_406_c_102 | Rep_406_c_102_29 | 27748 | 29808 | - | 3.A.7.7.1 |
Gene ID: Rep_406_c_102_24
Type: TC
Location: 22460 - 23896 (+)
Type: TC
Location: 22460 - 23896 (+)
Gene ID: Rep_406_c_102_25
Type: pfam
Location: 23893 - 24204 (+)
Type: pfam
Location: 23893 - 24204 (+)
Gene ID: Rep_406_c_102_26
Type: pfam
Location: 24264 - 24773 (+)
Type: pfam
Location: 24264 - 24773 (+)
Gene ID: Rep_406_c_102_27
Type: CAZyme
Location: 24800 - 25534 (-)
Type: CAZyme
Location: 24800 - 25534 (-)
Gene ID: Rep_406_c_102_28
Type: pfam
Location: 25754 - 27163 (+)
Type: pfam
Location: 25754 - 27163 (+)
Gene ID: Rep_406_c_102_29
Type: TC
Location: 27748 - 29808 (-)
Type: TC
Location: 27748 - 29808 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Duncaniella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.