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Cluster: Rep_401_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_401_c_0 Rep_401_c_0_377 455068 458373 - GH13_42
pfam Rep_401_c_0 Rep_401_c_0_378 458702 459856 - PdxA
TC Rep_401_c_0 Rep_401_c_0_379 459944 461377 - 1.A.23.4.5
NULL(UNKNOWN) Rep_401_c_0 Rep_401_c_0_380 461473 462732 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_401_c_0 Rep_401_c_0_381 462781 466167 - 3.A.5.1.1
Gene ID: Rep_401_c_0_377
Type: CAZyme
Location: 455068 - 458373 (-)
Gene ID: Rep_401_c_0_378
Type: pfam
Location: 458702 - 459856 (-)
Gene ID: Rep_401_c_0_379
Type: TC
Location: 459944 - 461377 (-)
Gene ID: Rep_401_c_0_380
Type:
Location: 461473 - 462732 (-)
Gene ID: Rep_401_c_0_381
Type: TC
Location: 462781 - 466167 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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