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Cluster: Rep_401_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_401_c_0 Rep_401_c_0_1623 2014580 2016277 + 3.A.1.120.6
pfam Rep_401_c_0 Rep_401_c_0_1624 2016319 2018691 + Omp85
pfam Rep_401_c_0 Rep_401_c_0_1625 2018729 2019382 + Hydrolase | HAD | HAD_2
CAZyme Rep_401_c_0 Rep_401_c_0_1626 2019386 2020825 - GH28
Gene ID: Rep_401_c_0_1623
Type: TC
Location: 2014580 - 2016277 (+)
Gene ID: Rep_401_c_0_1624
Type: pfam
Location: 2016319 - 2018691 (+)
Gene ID: Rep_401_c_0_1625
Type: pfam
Location: 2018729 - 2019382 (+)
Gene ID: Rep_401_c_0_1626
Type: CAZyme
Location: 2019386 - 2020825 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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