dbCAN Logo

Cluster: Rep_401_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_401_c_0 Rep_401_c_0_1557 1939668 1941644 + GH51_2
NULL(UNKNOWN) Rep_401_c_0 Rep_401_c_0_1558 1941676 1942116 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_401_c_0 Rep_401_c_0_1559 1942315 1943760 + 4.C.1.1.6
pfam Rep_401_c_0 Rep_401_c_0_1560 1943757 1944224 + Acetyltransf_1 | Acetyltransf_7 | Acetyltransf_10
pfam Rep_401_c_0 Rep_401_c_0_1561 1944196 1944876 + Esterase
TC Rep_401_c_0 Rep_401_c_0_1562 1945298 1946632 + 2.A.66.1.36
STP Rep_401_c_0 Rep_401_c_0_1563 1946640 1947473 + TPR_1 | TPR_2
pfam Rep_401_c_0 Rep_401_c_0_1564 1947608 1948159 + DUF4199
CAZyme Rep_401_c_0 Rep_401_c_0_1565 1948184 1949152 + GT2
Gene ID: Rep_401_c_0_1557
Type: CAZyme
Location: 1939668 - 1941644 (+)
Gene ID: Rep_401_c_0_1558
Type:
Location: 1941676 - 1942116 (+)
Gene ID: Rep_401_c_0_1559
Type: TC
Location: 1942315 - 1943760 (+)
Gene ID: Rep_401_c_0_1560
Type: pfam
Location: 1943757 - 1944224 (+)
Gene ID: Rep_401_c_0_1561
Type: pfam
Location: 1944196 - 1944876 (+)
Gene ID: Rep_401_c_0_1562
Type: TC
Location: 1945298 - 1946632 (+)
Gene ID: Rep_401_c_0_1563
Type: STP
Location: 1946640 - 1947473 (+)
Gene ID: Rep_401_c_0_1564
Type: pfam
Location: 1947608 - 1948159 (+)
Gene ID: Rep_401_c_0_1565
Type: CAZyme
Location: 1948184 - 1949152 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List