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Cluster: Rep_401_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_401_c_0 Rep_401_c_0_988 1214637 1215800 + 2.A.6.1.15
TC Rep_401_c_0 Rep_401_c_0_989 1215868 1218978 + 2.A.6.1.7
pfam Rep_401_c_0 Rep_401_c_0_990 1218975 1220165 + OEP | OEP
pfam Rep_401_c_0 Rep_401_c_0_991 1220375 1220977 + GrpE
TC Rep_401_c_0 Rep_401_c_0_992 1221009 1222193 + 3.A.5.8.1
pfam Rep_401_c_0 Rep_401_c_0_993 1222299 1223417 - META | META
CAZyme Rep_401_c_0 Rep_401_c_0_994 1223652 1226156 + GH147
CAZyme Rep_401_c_0 Rep_401_c_0_995 1226345 1227511 + GH53
CAZyme Rep_401_c_0 Rep_401_c_0_996 1227567 1230089 + GH2
Gene ID: Rep_401_c_0_988
Type: TC
Location: 1214637 - 1215800 (+)
Gene ID: Rep_401_c_0_989
Type: TC
Location: 1215868 - 1218978 (+)
Gene ID: Rep_401_c_0_990
Type: pfam
Location: 1218975 - 1220165 (+)
Gene ID: Rep_401_c_0_991
Type: pfam
Location: 1220375 - 1220977 (+)
Gene ID: Rep_401_c_0_992
Type: TC
Location: 1221009 - 1222193 (+)
Gene ID: Rep_401_c_0_993
Type: pfam
Location: 1222299 - 1223417 (-)
Gene ID: Rep_401_c_0_994
Type: CAZyme
Location: 1223652 - 1226156 (+)
Gene ID: Rep_401_c_0_995
Type: CAZyme
Location: 1226345 - 1227511 (+)
Gene ID: Rep_401_c_0_996
Type: CAZyme
Location: 1227567 - 1230089 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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