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Cluster: Rep_401_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_401_c_0 Rep_401_c_0_946 1159840 1162554 - 4.A.2.1.17
pfam Rep_401_c_0 Rep_401_c_0_947 1162917 1164347 + TRAM | tRNA_U5-meth_tr | Methyltransf_31
STP Rep_401_c_0 Rep_401_c_0_948 1164359 1164799 - CYTH
TC Rep_401_c_0 Rep_401_c_0_949 1164851 1167247 + 1.B.14.6.14
pfam Rep_401_c_0 Rep_401_c_0_950 1167332 1167706 - Ribonuc_L-PSP
TC Rep_401_c_0 Rep_401_c_0_951 1167728 1169167 - 9.B.126.2.2
CAZyme Rep_401_c_0 Rep_401_c_0_952 1169246 1170661 - GH13_28
Gene ID: Rep_401_c_0_946
Type: TC
Location: 1159840 - 1162554 (-)
Gene ID: Rep_401_c_0_947
Type: pfam
Location: 1162917 - 1164347 (+)
Gene ID: Rep_401_c_0_948
Type: STP
Location: 1164359 - 1164799 (-)
Gene ID: Rep_401_c_0_949
Type: TC
Location: 1164851 - 1167247 (+)
Gene ID: Rep_401_c_0_950
Type: pfam
Location: 1167332 - 1167706 (-)
Gene ID: Rep_401_c_0_951
Type: TC
Location: 1167728 - 1169167 (-)
Gene ID: Rep_401_c_0_952
Type: CAZyme
Location: 1169246 - 1170661 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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