dbCAN Logo

Cluster: Rep_401_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_401_c_0 Rep_401_c_0_925 1140824 1141795 - 3.A.5.1.1
pfam Rep_401_c_0 Rep_401_c_0_926 1141899 1142687 - S6PP | Hydrolase_3
pfam Rep_401_c_0 Rep_401_c_0_927 1142741 1143139 - FKBP_C
CAZyme Rep_401_c_0 Rep_401_c_0_928 1143165 1144115 - GT2
CAZyme Rep_401_c_0 Rep_401_c_0_929 1144149 1144949 - CE4
CAZyme Rep_401_c_0 Rep_401_c_0_930 1145026 1146771 + GT83
Gene ID: Rep_401_c_0_925
Type: TC
Location: 1140824 - 1141795 (-)
Gene ID: Rep_401_c_0_926
Type: pfam
Location: 1141899 - 1142687 (-)
Gene ID: Rep_401_c_0_927
Type: pfam
Location: 1142741 - 1143139 (-)
Gene ID: Rep_401_c_0_928
Type: CAZyme
Location: 1143165 - 1144115 (-)
Gene ID: Rep_401_c_0_929
Type: CAZyme
Location: 1144149 - 1144949 (-)
Gene ID: Rep_401_c_0_930
Type: CAZyme
Location: 1145026 - 1146771 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List