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Cluster: Rep_401_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_401_c_0 Rep_401_c_0_53 57937 60573 - GH2
CAZyme Rep_401_c_0 Rep_401_c_0_54 60609 63038 - GH95
pfam Rep_401_c_0 Rep_401_c_0_55 63520 66132 + Fasciclin
sulfatase Rep_401_c_0 Rep_401_c_0_56 66206 69463 + S1_27
TC Rep_401_c_0 Rep_401_c_0_57 69496 71070 + 8.A.46.1.4
pfam Rep_401_c_0 Rep_401_c_0_58 71138 72991 + Fasciclin
pfam Rep_401_c_0 Rep_401_c_0_59 73044 74642 + Fasciclin
TC Rep_401_c_0 Rep_401_c_0_60 74854 78000 + 1.B.14.6.1
Gene ID: Rep_401_c_0_53
Type: CAZyme
Location: 57937 - 60573 (-)
Gene ID: Rep_401_c_0_54
Type: CAZyme
Location: 60609 - 63038 (-)
Gene ID: Rep_401_c_0_55
Type: pfam
Location: 63520 - 66132 (+)
Gene ID: Rep_401_c_0_56
Type: sulfatase
Location: 66206 - 69463 (+)
Gene ID: Rep_401_c_0_57
Type: TC
Location: 69496 - 71070 (+)
Gene ID: Rep_401_c_0_58
Type: pfam
Location: 71138 - 72991 (+)
Gene ID: Rep_401_c_0_59
Type: pfam
Location: 73044 - 74642 (+)
Gene ID: Rep_401_c_0_60
Type: TC
Location: 74854 - 78000 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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