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Cluster: Rep_399_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_399_c_0 Rep_399_c_0_2198 2616420 2618036 - GH30_4
sulfatase Rep_399_c_0 Rep_399_c_0_2199 2618132 2619760 - S1_27
NULL(UNKNOWN) Rep_399_c_0 Rep_399_c_0_2200 2619776 2619955 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_399_c_0 Rep_399_c_0_2201 2619931 2621358 - 1.B.14.6.1
TC Rep_399_c_0 Rep_399_c_0_2202 2621342 2622775 - 1.B.14.6.1
Gene ID: Rep_399_c_0_2198
Type: CAZyme
Location: 2616420 - 2618036 (-)
Gene ID: Rep_399_c_0_2199
Type: sulfatase
Location: 2618132 - 2619760 (-)
Gene ID: Rep_399_c_0_2200
Type:
Location: 2619776 - 2619955 (-)
Gene ID: Rep_399_c_0_2201
Type: TC
Location: 2619931 - 2621358 (-)
Gene ID: Rep_399_c_0_2202
Type: TC
Location: 2621342 - 2622775 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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