Cluster: Rep_399_CGC27
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_399
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_399_c_0 | Rep_399_c_0_2187 | 2602195 | 2604201 | + | GH2 |
| CAZyme | Rep_399_c_0 | Rep_399_c_0_2188 | 2604527 | 2608171 | + | GH141 |
| TF | Rep_399_c_0 | Rep_399_c_0_2189 | 2608274 | 2609158 | - | HTH_AraC | HTH_AraC |
| NULL(UNKNOWN) | Rep_399_c_0 | Rep_399_c_0_2190 | 2609684 | 2610049 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_399_c_0 | Rep_399_c_0_2191 | 2610134 | 2610628 | + | GH3 |
| pfam | Rep_399_c_0 | Rep_399_c_0_2192 | 2610738 | 2611571 | - | PHP |
| TC | Rep_399_c_0 | Rep_399_c_0_2193 | 2611679 | 2613139 | - | 2.A.114.1.4 |
Gene ID: Rep_399_c_0_2187
Type: CAZyme
Location: 2602195 - 2604201 (+)
Type: CAZyme
Location: 2602195 - 2604201 (+)
Gene ID: Rep_399_c_0_2188
Type: CAZyme
Location: 2604527 - 2608171 (+)
Type: CAZyme
Location: 2604527 - 2608171 (+)
Gene ID: Rep_399_c_0_2189
Type: TF
Location: 2608274 - 2609158 (-)
Type: TF
Location: 2608274 - 2609158 (-)
Gene ID: Rep_399_c_0_2190
Type:
Location: 2609684 - 2610049 (+)
Type:
Location: 2609684 - 2610049 (+)
Gene ID: Rep_399_c_0_2191
Type: CAZyme
Location: 2610134 - 2610628 (+)
Type: CAZyme
Location: 2610134 - 2610628 (+)
Gene ID: Rep_399_c_0_2192
Type: pfam
Location: 2610738 - 2611571 (-)
Type: pfam
Location: 2610738 - 2611571 (-)
Gene ID: Rep_399_c_0_2193
Type: TC
Location: 2611679 - 2613139 (-)
Type: TC
Location: 2611679 - 2613139 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
UBA7173
Species
UBA7173 sp900540205
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.