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Cluster: Rep_399_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_399_c_0 Rep_399_c_0_1494 1791597 1792823 - GH97
pfam Rep_399_c_0 Rep_399_c_0_1495 1793064 1794953 - Thioredoxin_8
pfam Rep_399_c_0 Rep_399_c_0_1496 1795152 1796453 - OEP | OEP
TC Rep_399_c_0 Rep_399_c_0_1497 1796484 1797584 - 2.A.6.2.27
TC Rep_399_c_0 Rep_399_c_0_1498 1797635 1798774 - 3.A.1.122.12
TC Rep_399_c_0 Rep_399_c_0_1499 1799559 1800785 + 2.A.1.21.1
Gene ID: Rep_399_c_0_1494
Type: CAZyme
Location: 1791597 - 1792823 (-)
Gene ID: Rep_399_c_0_1495
Type: pfam
Location: 1793064 - 1794953 (-)
Gene ID: Rep_399_c_0_1496
Type: pfam
Location: 1795152 - 1796453 (-)
Gene ID: Rep_399_c_0_1497
Type: TC
Location: 1796484 - 1797584 (-)
Gene ID: Rep_399_c_0_1498
Type: TC
Location: 1797635 - 1798774 (-)
Gene ID: Rep_399_c_0_1499
Type: TC
Location: 1799559 - 1800785 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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