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Cluster: Rep_399_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_399_c_0 Rep_399_c_0_1359 1628616 1630199 - PL29
pfam Rep_399_c_0 Rep_399_c_0_1360 1630196 1631173 - DUF5017
TC Rep_399_c_0 Rep_399_c_0_1361 1631173 1632789 - 8.A.46.1.3
TC Rep_399_c_0 Rep_399_c_0_1362 1632786 1635926 - 1.B.14.6.1
CAZyme Rep_399_c_0 Rep_399_c_0_1363 1635952 1637169 - GH88
Gene ID: Rep_399_c_0_1359
Type: CAZyme
Location: 1628616 - 1630199 (-)
Gene ID: Rep_399_c_0_1360
Type: pfam
Location: 1630196 - 1631173 (-)
Gene ID: Rep_399_c_0_1361
Type: TC
Location: 1631173 - 1632789 (-)
Gene ID: Rep_399_c_0_1362
Type: TC
Location: 1632786 - 1635926 (-)
Gene ID: Rep_399_c_0_1363
Type: CAZyme
Location: 1635952 - 1637169 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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