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Cluster: Rep_399_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_399_c_0 Rep_399_c_0_975 1200373 1203813 + 1.B.14.6.1
pfam Rep_399_c_0 Rep_399_c_0_976 1203865 1205487 + SusD_RagB | SusD-like_3
CAZyme Rep_399_c_0 Rep_399_c_0_977 1205514 1206524 + GH43_18
NULL(UNKNOWN) Rep_399_c_0 Rep_399_c_0_978 1206543 1208615 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_399_c_0 Rep_399_c_0_979 1209149 1211431 + GH3
CAZyme Rep_399_c_0 Rep_399_c_0_980 1211444 1213978 + GH30_5
CAZyme Rep_399_c_0 Rep_399_c_0_981 1214010 1214978 + GH43_17
NULL(UNKNOWN) Rep_399_c_0 Rep_399_c_0_982 1215135 1216937 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_399_c_0 Rep_399_c_0_983 1217064 1218887 + GH36
Gene ID: Rep_399_c_0_975
Type: TC
Location: 1200373 - 1203813 (+)
Gene ID: Rep_399_c_0_976
Type: pfam
Location: 1203865 - 1205487 (+)
Gene ID: Rep_399_c_0_977
Type: CAZyme
Location: 1205514 - 1206524 (+)
Gene ID: Rep_399_c_0_978
Type:
Location: 1206543 - 1208615 (+)
Gene ID: Rep_399_c_0_979
Type: CAZyme
Location: 1209149 - 1211431 (+)
Gene ID: Rep_399_c_0_980
Type: CAZyme
Location: 1211444 - 1213978 (+)
Gene ID: Rep_399_c_0_981
Type: CAZyme
Location: 1214010 - 1214978 (+)
Gene ID: Rep_399_c_0_982
Type:
Location: 1215135 - 1216937 (+)
Gene ID: Rep_399_c_0_983
Type: CAZyme
Location: 1217064 - 1218887 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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